locus tag:
FAM19471-i1-1.1_001510
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
KEGG reaction
|
R03658 |
L-lysine:tRNALys ligase (AMP-forming); ATP + L-Lysine + tRNA(Lys) <=> AMP + Diphosphate + L-Lysyl-tRNA |
kornec00970 |
|
Ortholog
|
N0.HOG0001274 |
lysine--tRNA ligase |
|
|
Gene Code
|
lysS |
|
|
|
Gene Product
|
lysine--tRNA ligase |
|
|
|
KEGG gene
|
K04567 |
KARS, lysS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] |
kornec00970 |
|
Eggnog Protein
|
EP:lysS |
|
|
|
Eggnog Ortholog
|
EO:COG1190 |
|
|
|
Eggnog Description
|
ED:Belongs to the class-II aminoacyl-tRNA synthetase family |
|
|
|
EC Number
|
EC:6.1.1.6 |
lysine---tRNA ligase; lysyl-tRNA synthetase; lysyl-transfer ribonucleate synthetase; lysyl-transfer RNA synthetase; L-lysine-transfer RNA ligase; lysine-tRNA synthetase; lysine translase |
kornec00970 |
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec00970
|
Aminoacyl-tRNA biosynthesis |
Sequences
Nucleotide sequence (GC-content: 49.8 %):
ATGGCGAATGAAGAGCATTTGAACGACCAGATGGTGGTTCGACGGGAAAAGATGCAGGCATTAAGGGACCAAGGGGTGGCGCCGTTTGGTCACCGTTTTGATCCGGACCACGATTTATCCACGGATATCCGCAAGAAGTACGAAAACGATAGCGGTGAACTACTGTTAGCCCAACACAACGTCGTAACGATTGCGGGACGGATGATCGGAAAACGGGGAAGCGGGAAGGCGTCCTTTGCCGACCTATTGGACCGGGGAGGCAAGATCCAATTCTACGTTCGCCAAGATATGGTGGGGGAAGAAGCCTACAAGCTATTCAAAGAATCCGACTTAGGGGATTTCTGGGGGATTACTGGTGATGTAATCAAAACCCGGATGGGCGAACTGACGGTGCGGGCCGAAAAGATTACCTTTTTATCCAAGGCCCTCCGTCCGCTGCCGGATAAGTACCACGGCTTGCAGGACCCAGAGTTAGTCTACCGTCAGCGTTACTTGGACCTGATCACTAACCGGGAAAGCTTCGAACGTTTCCAAACCAGGACTAAGATTATTAAAGCCGTGCGCCGTTACATGGACGATAATGGCTTCTTAGAGGTGGAAACCCCCATCCTAGAAAACATTGCCTCCGGGGCTGAGGCGCGGCCGTTTGTGACCCACCACAACGCCTTAAACATTGATATGTACATGCGAATTGCCACCGAACTACGGCTTAAGCGCCTAATTGTCGGCGGGATGGAACGAGTTTACGAACTGGGGCGGATCTTCCGTAACGAAGGGATGGACCCGTACCACAACCCTGAATTCGATACGATGGAAACCTACGCCGCTTACTTCGACTTCAACGACGTGATGAAGGAAACGGAAGGGATTTTTAAGGCTGCCGCTGGTGTAGTTGCTGATGACTTAAAGATTACCTACCAAGGAACGGAACTCGATTTCAGTACCTCCTTTAAGCGTCTCCACATGGTGGATGCCATTAAGGAAGCAACGGGAATCGACTTCTGGCAAGAAATGACCGTTGAAGAGGCCCGTAAGCTGGCTGATGACAACGGAATTAAATACGAGAGTTGGTGGAAGGTTGGTCACATTATTAACGCCTTCTTTGAAGAAAAGGTTCAAGATACCTTGGAACAACCGATTTTTATCTATGGTCACCCGGTAGAAGTCTCACCGTTAGCAAAGATTAACGAAGAGGATTCCCGTTTTACTGACCGGTTTGAACTGTACATTTTGGGTAAGGAATACGCGAATGCCTTCTCTGAATTAAACGACCCAATTGATCAACGCAAGCGTTTTAAGGCACAAGCTCAAGAAAACGCTGAGGGTAACGATGAAGCCCAGCCGATTGACGAGGACTTTGTTGAAGCACTCGAATACGGGATGCCGCCTACCGGTGGGCTCGGGGTCGGAATCGACCGGATGGTAATGTTGATGACGGACGCAAAGTCAATTCGCGACGTCTTATTATTCCCAACGATGCGACCAAAGAAGTAG
Protein sequence:
MANEEHLNDQMVVRREKMQALRDQGVAPFGHRFDPDHDLSTDIRKKYENDSGELLLAQHNVVTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGITGDVIKTRMGELTVRAEKITFLSKALRPLPDKYHGLQDPELVYRQRYLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNALNIDMYMRIATELRLKRLIVGGMERVYELGRIFRNEGMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQGTELDFSTSFKRLHMVDAIKEATGIDFWQEMTVEEARKLADDNGIKYESWWKVGHIINAFFEEKVQDTLEQPIFIYGHPVEVSPLAKINEEDSRFTDRFELYILGKEYANAFSELNDPIDQRKRFKAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLFPTMRPKK
GenBank Info
gene - lysS
locus_tag - FAM19471-i1-1.1_001510
EC_number - 6.1.1.6
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686497.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - lysine--tRNA ligase
protein_id - extdb:FAM19471-i1-1.1_001510
Gene Locus
Located on scaffold FAM19471-i1-1_scf34
FAM19471-i1-1.1_001509
