OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_001541
locus tag:
FAM19471-i1-1.1_001541
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Code
uvrA
Ortholog
N0.HOG0001302 excinuclease ABC subunit UvrA
KEGG gene
K03701 uvrA; excinuclease ABC subunit A
kornec03420
Gene Product
excinuclease ABC subunit UvrA
Eggnog Protein
EP:uvrA
Eggnog Ortholog
EO:COG0178
Eggnog Description
ED:The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB
EC Number
EC:3.1.25.- -
Occurs in the following pathway maps:
Pathway
Description
kornec03420
Nucleotide excision repair
Sequences
Nucleotide sequence (GC-content: 56.3 %):
A T G G C A A A C G A A A A G A T T G T A A T T C G G G G T G C C C G G G C A C A T A A C T T A A A G A A C A T T G A C G T G A C G A T C C C C A A G A A T A A G T T G G T C G T C A T C A C G G G G C T G T C T G G T T C C G G C A A G T C C T C C T T A G C C T T T G A T A C C T T A T A C G C T G A G G G G C A G C G C C G G T A C G T G G A G A G C T T G T C G G C T T A T G C G C G C C A G T T C C T T G G C C A A A T G G A T A A G C C G G A C G T G G A C T C A A T T G A A G G G C T A T C G C C G G C G A T C T C G A T T G A T C A A A A A A C G A C T T C C C A T A A C C C C C G T T C A A C G G T G G G G A C G G T G A C G G A A A T T A A C G A C T T C T T G C G C C T C T T G T G G G C C C G G G T G G G G A C G C C G C T T T G T C C C A C C C A C G G G G T A C C A A T T G C C A G C C A A T C A C C T G A G C A A A T G G T T A A C C A G A T C C T A G A G T T G C C A G A A C G G A C C C G C C T G C A G G T A C T G G C G C C G G T C G T C C A C G A A A A G C G G G G G A C C C A A A A G G C G G T G T T A G C C A A G A T C A A A A A G G A C G G C T T T G T C C G G G T G C A A G T T G A C G G T G A A A C C T A C G A C G T C G A T G A G G T G C C G G A A C T G G A G A A G A A C A A G A A G C A C T C C A T T G A C G T G G T G G T G G A C C G C A T T A T C G T G A A A G A C G G C G T T C G T T C A C G C C T G T T T G A C T C C T T T G A A G C G G C C T T G C G C C T G G C C G A T G G G G T G G C G G T G G C C G A C A T T A T T G G C G G T G A G A A G A T C C C C T T T T C C G A A C A C T A C G C C T G C C C G T A C G G T G A C T T C T C G A T G C C C G A A C T G G A A C C A C G G T T G T T C T C C T T C A A C G C C C C G C T G G G T G C C T G C C C T G T T T G T G A G G G G C T C G G G A G T A A G T T A G A A G T T G A C G T C G A C C T C G T G G T T C C C G A T C A A A C G A A G A C C T T A A A C G A G G G G G C C T T A G T G C C G T G G A A C C C A A T C T C T T C T A A G T A C T A C C C C A G C C T G T T G G C C C A G T A C T G C G C G G C C G C C G G G A T T G A C A T G G A C A C C C C C T T T G A A G A C T T C G A T G A C C A A A C C A A G C A C C A G C T T T T G T A C G G T G A T G A C T T A A C C T T C C A C T T C C A C T A C C A A A A T G A C T T T G G C G G C A T T C G T G A C G T C G A C G T G A C C T T T G A G G G G G T G G T C A A T A A C G T T T C C C G C C G C T A C A A G G A A A C G A A C T C C G A C T T C A C C C G C G A G C A G A T G C G T A A G T A C A T G G C C G A G T T G C C G T G C C C A G C C T G C C A C G G T T A C C G G C T C A A C G A A C A G G C C T T G G C A G T G A A G G T G G C G G G C C A A A A C A T T G G T C A G G T T T C G G A A C T G C C G A T T T C T G A A G A A A T T G A C T T T T T C C A G C G G G T T C A C T T G T C T G A A C A A G A C C A A G A G A T T G C C C G G C C A A T T C T A A A G G A A A T T C T C G A C C G G C T G A C C T T T A T G C A A A A C G T G G G G G T T G A G T A C T T G A C C C T C T C C C G G T C G G C A C G G A C C C T C T C C G G G G G G G A G G C C C A G C G A A T T C G G T T G G C G A C C C A G A T C G G T T C C A A C T T G T C C G G G G T C A T G T A C G T G T T A G A T G A A C C A T C G A T T G G G C T C C A C C A G C G C G A T A A T G A C C G C T T G A T T A A C T C A C T G A A G A A G A T G C G T G A C C T G G G G A A C A C C C T G A T T G T C G T G G A A C A C G A T G A G G A T A C G A T G C G G G C G G C C G A T T A C A T C A T C G A C A T T G G T C C G G A G G C C G G C G A A G A C G G T G G T C A G G T G A T G G C G G C T G G G A C C C C G A A A C A G A T T A T G C G C T C A C G C A A G T C T T T G A C C G G T A A G T A C C T G T C G G G A C G G G A G A T G A T T C C G G T A C C C A G C G A G C G T C G A T C T G G C A A T G G C C A C G T C T T G A C C C T C G T G G G G G C C A G G G A A A A C A A C C T C A A A G A C A T C A C C G T T A A G T T C C C A C T G G G G A A G T T T A T C T G C G T C A C C G G G G T G T C T G G C T C C G G T A A G T C G A C C C T G G T T A A C C A G A T C C T C A A G C G G A T C C T G G C C C A G C A A C T A A A C C G G G C C A G C G A C A A G C C A G G G C G T T A C A A G G A G A T C C G C G G C T T G G A A A A C G T G G A A A A G G T G A T C G A C A T T G A T C A G T C A C C A A T T G G G C G G A C G C C G C G C T C G A A C C C G G C C A C C T A C A C G G G G G T C T T T G A C G A C A T C C G G G G C C T G T T C G C C C A A A C T A A T G A G G C C A A G T T A C G G G G G T A C G G A A A G G G C C G C T T C T C C T T T A A C G T C A A G G G G G G A C G G T G T G A A G C C T G C C A C G G G G A C G G A A T T A T C A A G A T T G A G A T G A A C T T C T T G C C C G A C G T C T A C G T T C C C T G C G A G G T T T G C C A C G G C A C C C G T T A C A A C T C G G A A A C C T T G G A G G T T G A A T A C A A G G G C A A A A A C A T C G C T C A G A T C T T A G A C A T G A C C G T T G A A G A G G C C C T C C A C T T T T T C A G T G C G A T T C C C A A G A T T C G G C G T A A G C T T C A A A C G A T T C A A G A C G T T G G C C T A G G C T A C G T T C A C C T C G G C C A G C C A G C C A C C A C C C T G T C C G G G G G G G A A G C C C A A C G G A T G A A A C T G G C T A G T G A G T T G C A C C G T C A A T C T A A C G G G C G T T C C T T T T A T A T C C T C G A C G A A C C A A C G A C C G G G C T C C A C A T G G C C G A C A T C A A G T G C C T G C T A G C A G T G C T A C A G C G C C T A G T T G A C G C T G G G A A C A C C G T T T T G G T G A T C G A A C A C G A C T T A G A C G T G G T C A A G T C G G C C G A C T G G T T G A T T G A C C T C G G T C C C G A G G G G G G G C A A G C C G G T G G A G A A A T T G T C G C T A C C G G A A C C C C G G A A G A A G T G G C C C A G G T C C C A G C T T C T T A C A C G G G T C A C T A C C T C A A G G A G A T G T T G G A C C G G G A T G C C A A G T G G G C G G C G G A A C G G G C C G C T A A A A A G A A G A A G T A A
Protein sequence:
M A N E K I V I R G A R A H N L K N I D V T I P K N K L V V I T G L S G S G K S S L A F D T L Y A E G Q R R Y V E S L S A Y A R Q F L G Q M D K P D V D S I E G L S P A I S I D Q K T T S H N P R S T V G T V T E I N D F L R L L W A R V G T P L C P T H G V P I A S Q S P E Q M V N Q I L E L P E R T R L Q V L A P V V H E K R G T Q K A V L A K I K K D G F V R V Q V D G E T Y D V D E V P E L E K N K K H S I D V V V D R I I V K D G V R S R L F D S F E A A L R L A D G V A V A D I I G G E K I P F S E H Y A C P Y G D F S M P E L E P R L F S F N A P L G A C P V C E G L G S K L E V D V D L V V P D Q T K T L N E G A L V P W N P I S S K Y Y P S L L A Q Y C A A A G I D M D T P F E D F D D Q T K H Q L L Y G D D L T F H F H Y Q N D F G G I R D V D V T F E G V V N N V S R R Y K E T N S D F T R E Q M R K Y M A E L P C P A C H G Y R L N E Q A L A V K V A G Q N I G Q V S E L P I S E E I D F F Q R V H L S E Q D Q E I A R P I L K E I L D R L T F M Q N V G V E Y L T L S R S A R T L S G G E A Q R I R L A T Q I G S N L S G V M Y V L D E P S I G L H Q R D N D R L I N S L K K M R D L G N T L I V V E H D E D T M R A A D Y I I D I G P E A G E D G G Q V M A A G T P K Q I M R S R K S L T G K Y L S G R E M I P V P S E R R S G N G H V L T L V G A R E N N L K D I T V K F P L G K F I C V T G V S G S G K S T L V N Q I L K R I L A Q Q L N R A S D K P G R Y K E I R G L E N V E K V I D I D Q S P I G R T P R S N P A T Y T G V F D D I R G L F A Q T N E A K L R G Y G K G R F S F N V K G G R C E A C H G D G I I K I E M N F L P D V Y V P C E V C H G T R Y N S E T L E V E Y K G K N I A Q I L D M T V E E A L H F F S A I P K I R R K L Q T I Q D V G L G Y V H L G Q P A T T L S G G E A Q R M K L A S E L H R Q S N G R S F Y I L D E P T T G L H M A D I K C L L A V L Q R L V D A G N T V L V I E H D L D V V K S A D W L I D L G P E G G Q A G G E I V A T G T P E E V A Q V P A S Y T G H Y L K E M L D R D A K W A A E R A A K K K K
GenBank Info
gene - uvrA
Gene Locus
Located on scaffold FAM19471-i1-1_scf35
FAM19471-i1-1.1_001540
