update range to 10000 bp
locus tag: FAM19471-i1-1.1_001335 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R04144 5-Phospho-D-ribosylamine:glycine ligase (ADP-forming); ATP + 5-Phosphoribosylamine + Glycine <=> ADP + Orthophosphate + 5'-Phosphoribosylglycinamide kornec00230kornec01100kornec01110
Gene Code
 purD
Gene Product
 phosphoribosylamine--glycine ligase
Ortholog
 N0.HOG0001364 phosphoribosylamine--glycine ligase
KEGG gene
 K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] kornec00230kornec01100kornec01110
Eggnog Protein
 EP:purD
Eggnog Ortholog
 EO:COG0151
Eggnog Description
 ED:Belongs to the GARS family
EC Number
 EC:6.3.4.13 phosphoribosylamine---glycine ligase; phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase; phosphoribosylglycineamide synthetase; glycineamide ribonucleotide synthetase; 2-amino-N-ribosylacetamide 5'-phosphate kinosynthase; 5'-phosphoribosylglycinamide synthetase; GAR kornec00230kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 57.2 %):

ATGACATTACAAAACGTGTTGGTGATCGGTAACGGGGGCCGCGAGTTTGCGATCGCTAAGAAACTAAAGCAAAGCCCCAAGGTCGACCACGTCTACTGCGCACCGGGCAACGTTGGGATGCCAACGGTTGGGGTTGAACCGGTGGCGATCGAAGAACTGGACTTTGCTGGGTTGATTAAGTTTGCCCAGGAGCACCAGGTAGCCTGGACCTTCGTTGGCCCGGAAGACGCCCTGGTGGCTGGGATCGTCGACGAATTTCAAACGGCGGGGCTAAAGATCTTTGGCCCTAACGCCCGGGCGGCCCAGCTGGAAGGTTCTAAGGAATACGCCCTCTCCTTTATGAACAAGTACGGGGTTCCGACCGCCAAGCACCTGGCCTTTGAAAACGAGGCCGAAGCCCTGACGCACGTGGCCGACTTCGGCTTCCCGGTCGTCTTGAAGTTAGACGGCCTCGCCGGCGGGAAGGGGGTCGTGATTGCGAGCGACCAGGCTGATGCCGAAGCGACGATTAAGGAAATGTTTGCGGACCACACCGGCCGGCTGGTGATTGAAGAGTGTTTGGTGGGACCGGAATATTCGATGTTTGTCCTGATCGAAAACGGCGACTACCAAATCTTACCGATGGCCCAGGACCACAAGCGGGCCTACGATGGCGATAAGGGTCCCAACACCGGCGGGATGGGCGCCTACAGCCCGCTGCCCCAGTTGAGTGAATTCGACCGCCAACGGATGGTCGAAGAAGTGGTGGAACCAAGCGTCAAGGGACTTGTGGACGGGGAGTACGACTACCACGGGATCCTCTACATCGGCTTGATGCTGACTGAAGATGGACCCAAGGTGATTGAATATAACGTTCGCCTGGGCGACCCGGAGACCCAAGTGATCTTGCCGCGGCTGGCAACCGATTTATTTGACCTGGTTGACGCTTGTGTCAACGACCAGCCCCTGCCGGAAGTGGTTGAAAAAGAGGACGCCGTTTTAGGGGTGGTGGTGGCCTCAAAGGGTTACCCGCAAAAGCCGGTCAAAAACCAAGCGTTGGGCAAGTTCCCGGTGGCCGGCAACATCACGGTCGATTACGCTAACGTGGCCGGTAGTTTAGCCGACTTACACGGGGCGGGGGGCCGGCTGTTGATGGTGATTGCCACGGCTAGTGATTTAAAGCAGGCCCAACAAGACGTCTACGCTTACCTCAACCAACTGGAGGAACCGGAGTGCTTCTGGCGCCAAGACATTGGAGAAAAGGCGTTTAATTAA

Protein sequence:

MTLQNVLVIGNGGREFAIAKKLKQSPKVDHVYCAPGNVGMPTVGVEPVAIEELDFAGLIKFAQEHQVAWTFVGPEDALVAGIVDEFQTAGLKIFGPNARAAQLEGSKEYALSFMNKYGVPTAKHLAFENEAEALTHVADFGFPVVLKLDGLAGGKGVVIASDQADAEATIKEMFADHTGRLVIEECLVGPEYSMFVLIENGDYQILPMAQDHKRAYDGDKGPNTGGMGAYSPLPQLSEFDRQRMVEEVVEPSVKGLVDGEYDYHGILYIGLMLTEDGPKVIEYNVRLGDPETQVILPRLATDLFDLVDACVNDQPLPEVVEKEDAVLGVVVASKGYPQKPVKNQALGKFPVAGNITVDYANVAGSLADLHGAGGRLLMVIATASDLKQAQQDVYAYLNQLEEPECFWRQDIGEKAFN

GenBank Info

gene - purD
locus_tag - FAM19471-i1-1.1_001335
EC_number - 6.3.4.13
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682505.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - phosphoribosylamine--glycine ligase
protein_id - extdb:FAM19471-i1-1.1_001335

Gene Locus

Located on scaffold FAM19471-i1-1_scf27

FAM19471-i1-1.1_001334
FAM19471-i1-1.1_001336